Halophibacterium profundimaris gen. Nov. Sp. Nov., a novel short alkane-degrading bacterium isolated

来源 :第五届青年海洋科学研讨会 | 被引量 : 0次 | 上传用户:yulie2
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A taxonomic study was carried out on strain PC39T, which was isolated from a PAHs-degrading consortium, enriched from a deep seawater sample collected from the Indian Ocean. The isolate was Gram-negative, short rods, no-mobile. Growth was observed at salinities from 1 to 36 % and at temperatures from 4 to 40, and it was able to degrade Tween 80 but no gelatin. Phylogenetic analysis of the 16S rDNA sequence reveals that strain PC39T forms a novel lineage close to the genus Salinisphaera, with the highest similarity to Salinisphaera sedimenticola T31B1T (92.7 %), followed by S. Dokdonensis CL-ES537 (91.8 %), Salinisphaera shabanensis E1L3AT (91.7 %) and S. Hydrothermalis EPR70T (91.2 %), all other species had sequence similarity below 89 %. The dominant fatty acids were Ci8:ifl>9c (30.52 %), Cig:0 (18.91 %), C19:0coSc cyclo (13.57 %), Sum Feature 8 (C18:)(a7c/a)6c) (10.35 %)C,6:0 (8.28 %), Sum Feature 7 (Ci9:I?c and/or ECL 18.846 and/or Ci9:0colQc cyclo) (8.01 %), and. The G+C content of the chromosomal DNA was 68.2 mol%. Phylogenetic analysis, as well as physiological and biochemical tests, showed that strain PC39T was different from all members of the genus Salinisphaera. Strain PC39T therefore represents a novel genus, for which the name Halophibacterium profundimaris gen. Nov. Sp. Nov. Is
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