Assessment of De Novo assemblers in cultivated tetraploid and wild diploid peanut species

来源 :The Sixth International Conference of the Peanut Research Co | 被引量 : 0次 | 上传用户：a13600660175

【摘要】

：

【作者】

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R Chopra G Burow A Farmer J Mudge CE Simpson T Wilkins MD Burow

【机构】

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Department of Plant and Soil Science,Texas Tech University,Lubbock,TX 79409,USA

【出处】

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The Sixth International Conference of the Peanut Research Co

【发表日期】

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2013年4期

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Advances in sequencing technologies have provided ample opportunities to study transcriptomes with reasonably lower costs.For non-model organisms such as Arachis lacking a well-defined genome sequence, it is very important to have a good transcriptome.Currently, the transcriptome assemblies in Arachis report 37,000 to 54,000 contigs in tetraploids with N50 values of 500-751bp.

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Assessment of De Novo assemblers in cultivated tetraploid and wild diploid peanut species

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