Epimutation profiling reveals cancer cell identity crisis

来源 :第七届全国生物信息学与系统生物学学术大会 | 被引量 : 0次 | 上传用户:yy692451568
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
  Cancer is both a genetic disease and an epigenetic diseases.Hallmarks of cancers include global DNA hypomethylation and local hypermethylation over promoters of tumor suppressor genes.Epigenetic therapies,including DNA methyltransferase inhibitors and HDAC inhibitors,have been thought to reactive tumor suppressor gene promoters to achieve efficacy.However,a comprehensive understanding of the impact of epimutations on cancer cells biology,both in the context of cancer cell abnormal DNA methylation and in the context of therapy induced DNA methylation changes,is still lacking.Using a comparative DNA methylomics approach,we profiled epimutations across multiple types of cancers as well as cancer cells under epigenetic therapy,and annotated these epimutations using the Human Reference Epigenome Maps produced by the Roadmap Epigenomics Consortium.Our results reveals that epimutations do not occur and cumulate randomely across cancer epigenome.Instead,they often occur in regulatory elements that normally specify cell fate,regardless of cell type from which the cancer is derived from,or unrelated cell type.Thus,the epimutation patterns of cancers suggest that cancer cells undergo identity crisis.This finding has potential implications in understanding the epigenetics impact on precision medicine,including how specific types of cancer cells metastasize,how they evade immune surveillance,and how therapies might take advance of the new identity cancer cells adopt to direct precision targeting.
其他文献
  During the past decades,many studies have led to biomarkers for cancer outcome predictions,which assist clinicians on selecting the effective treatment stra
会议
  We developed a computational approach to study tumor-infiltrating immune cells and their interactions with cancer cells.Analysis of over ten thousand RNA-se
会议
  Epigenetic mechanisms,such as DNA methylation,histone modification and non-coding RNA,can change gene expression and cause cancer without changing the under
会议
  Aim To investigate the effects of Ghrelin on vascular calcification in patients with type 2 diabetes.Methods Thirty cases of diabetic foot amputation patien
  A large number of genetic variants associated with human diseases are found in non-coding DNA and may contribute to illness by affecting gene regulation,but
会议
会议
  About 75 years ago,Jacques Monod discovered that bacteria display two types of growth behavior when fed with two sugars: in some cases the bacteria eat one
会议
会议
会议
会议