BSA-seq-based identification of a major additive plant height QTL with an effect equivalent to that

来源 :作物学报(英文版) | 被引量 : 0次 | 上传用户:cuida3
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
Bulked-segregant analysis is a time-and cost-saving strategy for identifying major quantitative trait loci (QTL) in a mapping population. Bulked-segregant analysis combined with whole-genome sequencing (BSA-seq) was performed to rapidly identify QTL for heading date, plant height, and panicle length in a large F2 population derived from two landraces:Chuan 7 (C7) and Haoboka (HBK). Twenty plants with extremely low or high phenotypic values for the target traits were selected from an F2 population of 940 plants to construct low- and high-value bulks. Three pairs of bulks for the three traits were con-structed, resulting in six DNA pools. BSA-seq revealed nine QTL: four for heading date, three for plant height, and two for panicle length. These QTL were validated in a random F2 population or BC4F2 popu-lations. The major novel plant height QTL, qPH8, acting additively with an effect equivalent to that of semi-dwarf 1 (sd1), is potentially valuable for hybrid rice breeding. qPH8 controls mainly the elongation of basal internodes. The C7 allele of qPH8 reduces plant height and increases lodging resistance without yield penalty, suggesting a potential role for qPH8 in improving rice plant architecture.
其他文献
The anther cuticle and pollen exine play a critical role in male gametophyte development. The sporopol-lenin precursors and cuticular lipid monomers are transported to the surface of the microspores and the epidermis by lipid transport proteins (LTPs) and
In rice, high-temperature stress (HT) during flowering results in decreased grain yield via a reduction in spi-kelet fertility;however, the effect of plant water status on spikelet fertility under HT remains unknown. To investigate the relationship betwee
Male sterility is a common biological phenomenon in plant kingdom and has been used to generate male-sterile lines, which are important genetic resources for commercial hybrid seed production. Although increasing numbers of male-sterility genes have been
A nuclear-encoded sigma (σ) factor is essential for the transcriptional regulation of plant chloroplast- encoded genes. Five putative maizeσfactors have been identified by database searches, but their func- tions are unknown. We report a maize leaf color
TaMs1 encodes a non-specific lipid transfer protein (nsLTP) and is required for pollen development in wheat. Although MS1 is a Poaceae-specific gene, the roles of MS1 genes in other Poaceae plants are unknown, especially in rice and maize. Here, we identi
The Nsa cytoplasmic male sterility (CMS) system confers stable male sterility and offers great potential for production of hybrid seeds in oilseed rape. However, genes responsible for male sterility in Nsa CMS have not been identified. By mitochondrial ge
Simple sequence repeat (SSR) markers have been proved to be a very powerful tool for quantitative trait locus (QTL) mapping, marker-assisted selection and comparative genomics research in many crop spe-cies. However, a high-density SSR genetic linkage map
Poor filling and low weight of inferior kernels limit the further improvement of wheat yield. Two culti-vars, Shuangda 1 and Xinong 538, with different grain weights, were selected to investigate the physio-logical changes of inferior kernels by removal o
Deep placement of nitrogen fertilizer is a key strategy for improving nitrogen use efficiency. A two-year field experiment was conducted during the early rice growing seasons (March-July) of 2016 and 2017. The experimental treatments comprised two rice cu
Common wheat (Triticum aestivum) is a hexaploid plant (AABBDD) derived from genetically related tetra-ploid wheat T. turgidum (AABB) and a diploid goatgrass Aegilops tauschii (DD). Recent advances in sequencing technology and genome assembly strategies al