,Bistability and oscillations in co-repressive synthetic microbial consortia

来源 :定量生物学(英文版) | 被引量 : 0次 | 上传用户:gaibian000000
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
Background:Synthetic microbial consortia are conglomerations of genetically engineered microbes programmed to cooperatively bring about population-level phenotypes.By coordinating their activity,the constituent strains can display emergent behaviors that are difficult to engineer into isogenic populations.To do so,strains are engineered to communicate with one another through intercellular signaling pathways that depend on cell density.Methods:Here,we used computational modeling to examine how the behavior of synthetic microbial consortia results from the interplay between population dynamics goveed by cell growth and inteal transcriptional dynamics goveed by cell-cell signaling.Specifically,we examined a synthetic microbial consortium in which two strains each produce signals that down-regulate transcription in the other.Within a single strain this regulatory topology is called a "co-repressive toggle switch" and can lead to bistability.Results:We found that in co-repressive synthetic microbial consortia the existence and stability of different states depend on population-level dynamics.As the two strains passively compete for space within the colony,their relative fractions fluctuate and thus alter the strengths of intercellular signals.These fluctuations drive the consortium to alteative equilibria.Additionally,if the growth rates of the strains depend on their transcriptional states,an additional feedback loop is created that can generate oscillations.Conclusions:Our findings demonstrate that the dynamics of microbial consortia cannot be predicted from their regulatory topologies alone,but are also determined by interactions between the strains.Therefore,when designing synthetic microbial consortia that use intercellular signaling,one must account for growth variations caused by the production of protein.
其他文献
期刊
为了探讨夏芝麻在砂姜黑土地上的高产稳产技术,我们从84年开始,在湖阳镇、湖阳村付立明同志承包的责任田里,对该项目进行了试验。经过几年的努力,终于在砂姜黑土地上摸索出
The promise that big data will revolutionize scientific discovery and technology innovation is now being widely recognized.With the explosive growth of biomedic
中麦2号是中国农科院作物所育成的冬小麦品种。具有丰产、稳产、高抗白粉病、早熟优质、对水肥反虚不敏感、耐旱性比较好、适应性广等特点。中麦2号穗呈纺锤型、长芒、白壳
In this paper, we study the asymptotic behavior of solutions to a class of higher order nonlinear integro-differential equations with deviating arguments. And s
79266是山东省花生研究所培育的早熟新品种,1989年引入我市试种,6月中旬播种,9月中旬成熟,全生育期90天左右,比天府三号早熟10多天,比伏花生早熟5天左右。该品种顶土能力强,
期刊
2014年一季度,中国进出口总值9658.8亿美元,同比下降1%;其中,出口4913.1亿美元,下降3.4%。当前,我国面临的外贸竞争日益激烈,仅2013年上半年,就有15个国家和地区对我发起39起
期刊