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The aim of this study was to explore the spatial distribution and submerged scope for storm surge in the Pearl River Delta (PRD) re- gion. Based on the data of storm surges in the PRD region in the past 30 years, the return periods of 12 tide-gauge stations for storm surges were calculated separately with the methods of Gumbel and Pearson-Ⅲ. The data of another six tide-gauge stations in Guangdong Coast was quoted to depict the overall features of storm surges in Guangdong. Using least-square method, the spatial distribution models of storm surges in different return periods were established to reveal the distribution rule of the set-up values of storm surges. The spatial distribution curves of storm surges in different return periods in the PRD Region were drawn up based on the models and the terrain of Guangdong Coast. According to the curves, the extreme set-up values of storm surges in 1 000,100, 10 a return periods were determined on each spot of Guangdong Coast. Applying the spatial analysis technology of ArcGIS, with the topography data of the PRD Region, the submerged scopes of flood caused by storm surge in 1 000, 100, 10 a return periods were drawn up. The loss caused by storm surges was estimated. Results showed that the storm surges and the topography of PRD region jointly led to the serious flood in the PRD region. This assessment would be useful for the planning and design department to make decision and provide government scientific basis for storm surge prediction, coastal engineering designing and the prevention of storm surge disaster.