Generally the incompressible viscous flow problem is described by the Navier-Stokes equation. Based on the weighted residual method the discrete formulation of element-free Galerkin is inferred in this paper. By the step-by-step computation in the field of time, and adopting the least-square estimation of the-same-order shift, this paper has calculated both velocity and pressure from the decoupling independent equations. Each time fraction Newton-Raphson iterative method is applied for the velocity and pressure. Finally, this paper puts the method into practice of the shear-drive cavity flow, verifying the validity, high accuracy and stability.