Based on the analysis of a virtual enterprise and the development of supply chain management, their integration is proposed. Then, the difference between multi-agent system modeling method and the traditional modeling method is analyzed, and a method based on Java agent framework for multi-agent systems(JAFMAS) is proposed. By using this method the virtual enterprise′s supply chain management system model is established. Based on the analysis of a virtual enterprise and the development of supply chain management, their integration is proposed. Then, the difference between multi-agent system modeling method and the traditional modeling method is analyzed, and a method based on Java agent framework for multi -agent systems (JAFMAS) is proposed. By using this method the virtual enterprise’s supply chain management system model is established.