Prediction of GPCR-G Protein Coupling Specificity Using Features of Sequences and Biological Functio

来源 :基因组、蛋白质组与生物信息学报(英文版) | 被引量 : 0次 | 上传用户:zhangduanhua870505
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
Understanding the coupling specificity between G protein-coupled receptors (GPCRs) and specific classes of G proteins is important for further elucidation of receptor functions within a cell. Increasing information on GPCR sequences and the G protein family would facilitate prediction of the coupling properties of GPCRs. In this study, we describe a novel approach for predicting the coupling specificity between GPCRs and G proteins. This method uses not only GPCR sequences but also the functional knowledge generated by natural language processing, and can achieve 92.2% prediction accuracy by using the C4.5 algorithm.Furthermore, rules related to GPCR-G protein coupling are generated. The combination of sequence analysis and text mining improves the prediction accuracy for GPCR-G protein coupling specificity, and also provides clues for understanding GPCR signaling.
其他文献
以在自然界中筛选到的一株产纤维素酶的丝状真菌尖镰孢菌F.oxysporum L19为材料,定时测定尖镰孢菌在10种碳源中的纤维素酶活力,发现酶的合成受培养基中碳源种类的调节控制.结
p-nitrotoluene is an important organic intermediate widely used in pesticide, foamed plastics, dyestuff and medicine industries. In this paper, Crusian carps (C
变性蛋白质与正常对照组的蛋白质的HPLC-MS谱图存在人工无法发现的差异性,也是本文所说的特征,本文的研究工作就是通过信息学的方法寻找这些特征.实际工作中,我们先从谱图中
随着生物技术的发展,人类遗传病的诊断技术愈发成熟,但在于遗传病治疗方面仍处于探索阶段.本文对遗传病及应用于遗传病诊断和治疗的生物技术作了简要的综述.
伴随时代的不断发展,科学技术的不断进步,人们对于资源能源的应用越来越关注。坚持可持续发展战略,实现经济建设的稳定发展,必须重视节能手段的应用。水利工程的发展进步能够
DNA polymerase Ⅲ is one of the five eubacterial DNA polymerases that is responsible for the replication of DNA duplex. Among the ten subunits of the DNA polyme
蛋白质的聚焦过程完成后,实现了压力驱动毛细管内完成聚焦的聚焦区带迁移,进行聚焦区带的检测.实验证明,在较低流速下不会破环聚焦区带,得到了理想的分离结果,方法可行,且操
Five indices of species richness, species diversity and species evenness were used to assess α diversity of four types of coniferous forests undergone differen
通过对一个大型女性队列的前瞻性研究,验证增加镁摄入量是否可降低心血管疾病的风险,包括心肌梗死和脑卒中.用一个半定量食物频率表评价39876名健康的职业女性(年龄:39~89岁),
在法国因缺乏对基础人群的诊断工具,从未建立过鼻息肉流行的数据,故在基础人群的随机样本中使用了新近有效的调查表/规则系统(90%特殊性和敏感性),用目前的横断面、病例-对照