Continuous monitoring of bed shear stress in large river systems may serve to better estimate alluvial sediment transport to the coastal ocean.Here we explore the possibility of using a horizontally deployed acoustic Doppler current profiler(ADCP) to monitor bed shear stress,applying a prescribed boundary layer model,previously used for discharge estimation.The model parameters include the local roughness length and a dip correction factor to account for sidewall effects.Both these parameters depend on river stage and on the position in the cross-section, and were estimated from shipborne ADCP data.We applied the calibrated boundary layer model to obtain bed shear stress estimates over the measuring range of the HADCP.To validate the results,co-located coupled ADCPs were used to infer bed shear stress,both from Reynolds stress profiles and from mean velocity profiles. From HADCP data collected over a period of 1.5 years,a time series of width profiles of bed shear stress was obtained for a tidal reach of the Mahakam River,East Kalimantan,Indonesia.A smaller dataset covering 25 hours was used for comparison with results from the coupled ADCPs.The bed shear stress estimates derived from Reynolds stress profiles appeared to be strongly affected by local effects causing upflow and downflow,which are not included in the boundary layer model used to derive bed shear stress with the horizontal ADCP.Bed shear stresses from the coupled ADCP are representative of a much more localized flow,while those derived with the horizontal ADCP resemble the net effect of the flow over larger scales.Bed shear stresses obtained from mean velocity profiles from the coupled ADCPs show a good agreement between the two methods,and highlight the robustness of the method to uncertainty in the estimates of the roughness length. Continuous monitoring of bed shear stress in large river systems may serve to better estimate alluvial sediment transport to the coastal ocean. Here we explore the possibility of using a layered deployed acoustic Doppler current profiler (ADCP) to monitor bed shear stress, applying a prescribed boundary layer model, previously used for discharge estimation. model parameters include the local roughness length and a dip correction factor to account for sidewall effects. The two parameters depend on river stage and on the position in the cross-section, and were estimated from shipborne ADCP data.We applied the calibrated boundary layer model to obtain bed shear stress estimates over the measuring range of the HADCP.To validate the results, co-located coupled ADCPs were used to infer bed shear stress, both from Reynolds stress profiles and from mean velocity profiles. From HADCP data collected over a period of 1.5 years, a time series of width profiles of bed shear stress was obtained f or a tidal reach of the Mahakam River, East Kalimantan, Indonesia. A smaller dataset covering 25 hours was used for comparison with results from the coupled ADCPs.The bed shear stress estimates derived from Reynolds stress profiles to be strongly affected by local causes [ upflow and downflow, which are not included in the boundary layer model used to derive bed shear stress with the horizontal ADCP.Bed shear stresses from the coupled ADCP are representative of a much more localized flow, while those derived with the horizontal ADCP resemble the net effect of the flow over a larger magnitude. Bed shear stresses obtained from mean velocity profiles from the coupled ADCPs show a good agreement between the two methods, and highlight the robustness of the method to uncertainty in the estimates of the roughness length.