Desert rhizoliths are generally found as weathered, broken and scattered samples on dune field surface, but rarely insitu in their initial states buried under the soil of desert in the Badain Jaran Desert, northwest China. This study off ers an assessment of the morphological, mineralogical, and chemical properties of intact and in-situ rhizoliths found in soils of swales and depressions among dune chains. The characteristics of these rare and precious objects were assessed using optical polarizing microscopy, cathodoluminescence, scanning electronic microscopy, radiocarbon dating, and stable isotopic analyses, providing the opportunity for discussion of the rhizolith formation mechanisms and associated environmental conditions. Field and laboratory investigations showed that the in-situ intact rhizoliths were formed only in the places where Artemisia shrubs are living, and the remaining root relicts within rhizoliths belong to this species. The spatial distribution of rhizoliths also suggested that low topographic positions on a landscape provided soil moisture, and redox environments favored rhizolith formation. A semi-closed redox environment in the subsoil at swales and depressions, where water is always present, along with the sandy soil texture, facilitated fast water percolation to deeper depths and condensation. Such a soil environment not only provides water for Artemisia growth, but also for the weathering of minerals such as felspars and calcite from primary carbonates, and for the decomposition of root relicts. Furthermore, harsh climatic conditions, such as strong winds and solar radiation, led to water evaporation through dead root channels and triggered the calcification along the root relicts. The entrapped lithogenic carbonates and to a lesser extent the decomposition of Artemisia roots provided the carbon sources for the rhizoliths formation, while the weathering of soil minerals, particularly feldspars and carbonates, was the main source of Ca. Rhizoliths in the Badain Jaran desert formed relatively quickly, probably over a few soil drying episodes. This led to the entrapment of a large quantity of lithogenic carbonates（more than 90% of carbon） within rhizolith cement. The re-dissolution of the entrapped lithogenic carbonates in rhizolith tubes should be taken into account in the paleoenvironmental interpretation of 14C ages, the latter suggesting that rhizoliths formed during the Holocene（～ 2053 years cal BP, based on root organic relicts）.